Antigen

Antigen Class

TFs and others

Antigen

Esr1

Cell type

Cell type Class

Liver

Cell type

Liver

MeSH Description

A large lobed glandular organ in the abdomen of vertebrates that is responsible for detoxification, metabolism, synthesis and storage of various substances.

Sample

source_name

Mouse liver

tissue

Liver

strain

C57BL/6

age

8 week old

chip antibody

ESR1

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

ChIP and library construction was performed as described in Reddy et al, Genome Research, 2009

Sequencing Platform

instrument_model

Illumina HiSeq 2000

mm10

Number of total reads

29385547

Reads aligned (%)

94.9

Duplicates removed (%)

11.6

Number of peaks

7167 (qval < 1E-05)

mm9

Number of total reads

29385547

Reads aligned (%)

94.7

Duplicates removed (%)

11.7

Number of peaks

7280 (qval < 1E-05)